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            Free, publicly-accessible full text available May 28, 2026
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            Free, publicly-accessible full text available November 16, 2025
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            The exponential scaling of complete active space and full configuration interaction (CI) calculations limits the ability of quantum chemists to simulate the electronic structures of strongly correlated systems. Herein, we present corner hierarchically approximated CI (CHACI), an approach to wave function compression based on corner hierarchical matrices (CH-matrices)—a new variant of hierarchical matrices based on block-wise low-rank decomposition. By application to dodecacene, a strongly correlated molecule, we demonstrate that CH matrix compression provides superior compression compared to truncated global singular value decomposition. The compression ratio is shown to improve with increasing active space size. By comparison of several alternative schemes, we demonstrate that superior compression is achieved by (a) using a blocking approach that emphasizes the upper-left corner of the CI vector, (b) sorting the CI vector prior to compression, and (c) optimizing the rank of each block to maximize information density.more » « lessFree, publicly-accessible full text available November 28, 2025
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            Abstract Identifying the short-lived intermediates and reaction mechanisms of multi-channel radical cation fragmentation processes remains a current and important challenge to understanding and predicting mass spectra. We find that coherent oscillations in the femtosecond time-dependent yields of several product ions following ultrafast strong-field ionization represent spectroscopic signatures that elucidate their mechanism of formation and identify the intermediate(s) they originate from. Experiments on endo-dicyclopentadiene show that vibrational frequencies from various intermediates are mapped onto their resulting products. Aided by ab initio methods, we identify the vibrational modes of both the cleaved and intact molecular ion intermediates. These results confirm stepwise and concerted fragmentation pathways of the dicyclopentadiene ion. This study highlights the power of tracking the femtosecond dynamics of all product ions simultaneously and sheds further light onto one of the fundamental reaction mechanisms in mass spectrometry, the retro-Diels Alder reaction.more » « lessFree, publicly-accessible full text available December 1, 2025
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            Computer simulation has long been an essential partner of ultrafast experiments, allowing the assignment of microscopic mechanistic detail to low-dimensional spectroscopic data. However, the ability of theory to make a priori predictions of ultrafast experimental results is relatively untested. Herein, as a part of a community challenge, we attempt to predict the signal of an upcoming ultrafast photochemical experiment using state-of-the-art theory in the context of preexisting experimental data. Specifically, we employ ab initio Ehrenfest with collapse to a block mixed quantum–classical simulations to describe the real-time evolution of the electrons and nuclei of cyclobutanone following excitation to the 3s Rydberg state. The gas-phase ultrafast electron diffraction (GUED) signal is simulated for direct comparison to an upcoming experiment at the Stanford Linear Accelerator Laboratory. Following initial ring-opening, dissociation via two distinct channels is observed: the C3 dissociation channel, producing cyclopropane and CO, and the C2 channel, producing CH2CO and C2H4. Direct calculations of the GUED signal indicate how the ring-opened intermediate, the C2 products, and the C3 products can be discriminated in the GUED signal. We also report an a priori analysis of anticipated errors in our predictions: without knowledge of the experimental result, which features of the spectrum do we feel confident we have predicted correctly, and which might we have wrong?more » « less
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            The surfaces of colloidal nanocrystals are frequently passivated with carboxylate ligands that exert significant effects on their optoelectronic properties and chemical stability. The binding geometries of these ligands are often experimentally investigated using vibrational spectroscopy, but the interpretation of the IR signal is usually not trivial. Here, using machine-learning (ML) algorithms trained on DFT data, we simulate an IR spectrum of a lead-rich PbS nanocrystal passivated with butyrate ligands. We obtain good agreement with the experimental signal and demonstrate that the observed line shape stems from a very wide range of “tilted-bridge”-type geometries and does not indicate the coexistence of “bridging” and “chelating” binding modes as has been previously assumed. This work illustrates the limitations of empirical spectrum assignment and demonstrates the effectiveness of ML-driven molecular dynamics simulations in reproducing the IR spectra of nanoscopic systems.more » « less
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            The lack of a detailed mechanistic understanding for plasmon-mediated charge transfer at metal-semiconductor interfaces severely limits the design of efficient photovoltaic and photocatalytic devices. A major remaining question is the relative contribution from indirect transfer of hot electrons generated by plasmon decay in the metal to the semiconductor compared to direct metal-to-semiconductor interfacial charge transfer. Here, we demonstrate an overall electron transfer efficiency of 44 ± 3% from gold nanorods to titanium oxide shells when excited on resonance. We prove that half of it originates from direct interfacial charge transfer mediated specifically by exciting the plasmon. We are able to distinguish between direct and indirect pathways through multimodal frequency-resolved approach measuring the homogeneous plasmon linewidth by single-particle scattering spectroscopy and time-resolved transient absorption spectroscopy with variable pump wavelengths. Our results signify that the direct plasmon-induced charge transfer pathway is a promising way to improve hot carrier extraction efficiency by circumventing metal intrinsic decay that results mainly in nonspecific heating.more » « less
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            A major challenge in the “bottom-up” solvothermal synthesis of carbon dots (CDs) is the removal of small-molecule byproducts, noncarbonized polyamides, or other impurities that confound the optical properties. In previously reported benzene diamine-based CDs, the observed fluorescence signal already has been shown to arise from free small molecules, not from nanosized carbonized dots. Here we have unambiguously identified the small-molecule species in the synthesis of CDs starting with several isomers of benzene diamine by directly matching their NMR, mass spectrometry, and optical data with commercially available small organic molecules. By combining dialysis and chromatography, we have sufficiently purified the CD reaction mixtures to measure the CD size by TEM and STM, elemental composition, optical absorption and emission, and single-particle blinking dynamics. The results can be rationalized by electronic structure calculations on small model CDs. Our results conclusively show that the purified benzene diamine-based CDs do not emit red fluorescence, so the quest for full-spectrum fluorescence from isomers of a single precursor molecule remains open.more » « less
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